For research use only. We do not supply to patients.
For pharmaceutical-grade products or other inquiries, please contact our experts.
seCLIP is a simplified, single-end variant of eCLIP for transcript-wide mapping of RNA-binding-protein (RBP) targets with nucleotide resolution. Redesigning the adapters, it obviates the expensive paired-end sequencing and retains quantitative precision and motif recovery.
Key protocol notes are noted: (1) supplementing with murine RNase inhibitor during the initial lysis step for RNase-rich tissues to avoid over-fragmentation; (2) switching to low-background lots of nitrocellulose membranes in case of contamination; and (3) using qPCR-guided PCR cycles to limit duplication. The workflow (UV crosslinking, RNase I trimming, immunoprecipitation, on-bead RNA/DNA ligation, PAGE isolation and a high-efficiency library construction) provides >1000-fold higher yield compared to older versions of CLIP, allowing for robust profiling of RBPs from low-input material at lower cost.
Fig. 1 Murine RNase inhibitor is used to avoid RNA over-fragmentation. (Van Nostrand E L.; et al. 2017)
References
Cat NO.: PIPB-0126
CAS NO.: 26873-85-8
Daily: 9.30 AM–6.00 PM
Sunday : 9.30 AM–1.00 PM
Holidays: Closed
All our products are chemicals for research purposes only. We do not supply for human or veterinary applications.
Privacy Policy | Cookie Policy Copyright © Protheragen. All Rights Reserved.
